genewise output Score 739.36 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000628_2.0 1 QDVKLSAEVEPFIPQKKGVDSSLLPMSLCGE------------GGA-EP QDVKLSAEVEPFIPQKKG++ L+ MSL GE GGA E QDVKLSAEVEPFIPQKKGLEGPLVSMSLSGEVGSGGGGGGVGGGGAVET OMLM01004801.1-10389 cggactggggctaccaagcggccgaaactggggagggggggggggggga aatatccatacttcaaagtagcttgtgtcgatggggggggtggggctac gtggtatagggccagaattaaaaccgtttaggctaagcataatcaagac SPP00000628_2.0 37 TQIPSYLITCYPFVQENQSSS QL T IPSYLITCYPFVQENQ Q TPIPSYLITCYPFVQENQP-N R:R[agg] QH OMLM01004801.1-10242 acacatcaattctgcgacc aAGGTATTGT Intron 1 CAGGcc cctcgattcgacttaaaac a <2-----[10180: 9087]-2> aa tcaccccccctctcggcac c at SPP00000628_2.0 61 PMYN-SEHRWQQLNPGPGGPYLAYPILSSPQPPVSSDYATYYHAIMPTP PMYN E RWQQ NP PGGPYLAYPILSSPQPPVS+DY TYY IMP P PMYNGGELRWQQPNPSPGGPYLAYPILSSPQPPVSNDY-TYYQ-IMPAP OMLM01004801.1:-9079 catagggcctcccacacggctcgtcatttccccgtagt attc aacgc ctaaggatggaacacgcggcatcacttcccacctcaaa caaa ttccc tgttagggcgggtctctttacgccccgtctattcatcc tccg tgttg SPP00000628_2.0 109 CPPVMGFYQPFPGPYGGPL----LNPLS-DCSDRPLQPG-----QTPRA CPP+MGFYQPFPG Y GP+ NP+S D +RPL G TPR CPPMMGFYQPFPGTYAGPVQAGVVNPVSADVGERPLPLGPAYGISTPRG OMLM01004801.1:-8938 tccaagttcctcgatggcgcggggacgtgggggactccgcgtgatacag gccttgtaactcgcacgctacgttactccatgagctctgccagtcccgg cacggcccgtttcctgtcgatagcctcaatttaaagtgcaataactgga SPP00000628_2.0 148 RSGARTPVLQK -PMVQPIRAKRPVMR R R +L K + QP R +RP R RGMVRPNILPK LGVCQPPRGRRPPTR OMLM01004801.1:-8791 agagacaaccaGTACAAG Intron 2 CAGtggtcccagccccaa ggttgcattca<0-----[8758 : 8648]-0>tgtgaccggggcccg acgcaattctg aagcgtagtcgtagg SPP00000628_2.0 173 SVAVQKEVCAAGPDGRSKTVLLVDAAQQT SVAVQKEVC GPDGR+KTVLLVDAAQQT SVAVQKEVCTFGPDGRTKTVLLVDAAQQT OMLM01004801.1:-8602 agggcaggtatgcggaaaagttggggcca gtctaaatgctgcaggcacttttaccaac tatgagggcctatttgcgacgggtaaagt SPP00000628_2.0 202 FPGEASGGVRCVSDQVSPQQWKN FP E SG RC +++ SP WKN D:D[gat] FPAEVSG--RCAAERASPSLWKN OMLM01004801.1:-8515 GGTAAGAG Intron 3 TAGATtcgggtg ctgggcgactctaa <1-----[8514 : 7912]-1> tccatcg ggccagcgcctgaa catgaaa ctttggtttagggc SPP00000628_2.0 226 KPRRRRTSQ-QESSSEQGASEADIDSDSGYCSPKHNQGAANPSSSQNTN + +RRR S ES +EQGASEADIDSDSGYCSPKHNQ A + N RTKRRRASHPTESYNEQGASEADIDSDSGYCSPKHNQ-ATGATQRTADN OMLM01004801.1:-7846 caaaacgtccagatagcggagggagagagttacacac gaggaccagga gcagggccaccagaaaagcgacatagaggaggcaaaa ccgccagccaa aagaaaactatacctggactaatactcccctccaccg atgaaaaaact SPP00000628_2.0 274 TAVHTA SHWGSVSSPGVQKPWSD TA T + W +V+S K W D TAAPTV A:C[tgt] T-WVNVASQATPKSWVD OMLM01004801.1:-7702 aggcagTGTTAGCT Intron 4 CAGGTa tgaggtcgacattgg ccccct <1-----[7683 : 6788]-1> c gtatccacccacgta aaacgg g gatactatcagcggc SPP00000628_2.0 298 RSTLFHRGS--RTPEQRSYTQM S R++ FHR + PEQR+ +Q+ RNSQFHRTDQRKNPEQRNISQV -:H[cac] G OMLM01004801.1:-6737 aaactcaagcaaacgcaaatcgCAGTAAGTC Intron 5 CAGCg gagatagcaagaacaagatcat <2-----[6669 : 6294]-2> g gctgccaacgggtcagaccaga c SPP00000628_2.0 319 FVGRVGG--QRRCTPPETPNTHLTPEPLYFQVCAHTHTHTHTHLTPQLL + GRV +R P T LTPEPLYF+V L + L YPGRVPNPSEQRLQPAVVTATELTPEPLYFEV--------REGLL!ECL OMLM01004801.1:-6289 tcgcgcactgcacccgggagagcacgccttgg aggtt1gtc acggtcaccaagtaccttcccatccactatat gagtt agt tagtgtcaaaagagaagctctgctagccctgt aatag act SPP00000628_2.0 366 YFHVYTHTHTEMQLNVIKCVLIITDIVCVCVCVCVCVCVCVRARACVCA ++ + H H M L V + VC+ C FY!ISLH-HCYMTLYV--------RVGSVCL---------------FCQ OMLM01004801.1:-6168 tt2attc cttaactg aggagtt ttc ta tcta agatctat gtggtgt tga tt ccat ttcgatct gatttca tca SPP00000628_2.0 415 RGFSALQDEDEFPDLATGSAAQRS-KPE--PAQ----PKLTKSLV F+ QDEDEFPDLATG QRS KPE PAQ PKL K+LV NLFA!CQDEDEFPDLATGGGVQRSNKPESTPAQTHTQPKLPKNLV OMLM01004801.1:-6094 actg4tcggggtcgcgaggggccaaacgtacgcacaccaccaacg attc gaaaaatcatccgggtaggaacaccccacacacatcaatt tttc tgtatgcattttagtcacccaaactataacgataacacga SPP00000628_2.0 453 --SVCVWMFVCVCVCVCDCISLL + V++ + + C S + -:I[atc] QIQIKVYIHSHILLISLSC-SPV OMLM01004801.1:-5958 AGTTTCTG Intron 6 CAGTCcacaagtacacattatttt tcg <1-----[5957 : 4173]-1> atatatatagattttctcg cct aaacattcttctgatagct tat SPP00000628_2.0 474 GTVGALHSKDGGVCVSGLKSSSYTPPHNMLDSTAPRIKRGKEREIPKVK GT HS + Y+ PHN LDSTAPRIKRGKEREIPKVK GTA-PFHSSTNLPSMLKGHQQPYSAPHNALDSTAPRIKRGKEREIPKVK OMLM01004801.1:-4104 gag ctcataacctatagccccttgccagcgtagccaaagagagacaga gcc ctagccatccttagaaacacccaactaccccgtaggaagatcata aat acccgctggcgggttggacaaattcgtctattcgagagaactata SPP00000628_2.0 523 KTTAMKK IILQEREVKKGKSSADQSV + TA+KK IIL+ERE KKGK+S +Q RPTALKK IILKEREGKKGKTSVEQES OMLM01004801.1:-3960 ccagcaaGTTAGTG Intron 7 TAGaacagcggaagaaaggcgt gccctaa<0-----[3939 : 3777]-0>tttaagagaagacgtaaac gaacggg tcggataggaggctaaagt SPP00000628_2.0 549 CEAEEQRDT-LSFTDTLTQE---QD EE D L FTD L++E Q+ SGQEEHGDECLHFTDDLSREPASQE E:E[gag] OMLM01004801.1:-3719 tgcggcgggtcctaggctcgcgtcgGGTGAGGG Intron 8 cgaaaagaagtatcaatcgacccaa <1-----[3643 : 3548] atgggtgtgtattttttaagtacaa SPP00000628_2.0 570 NGLSVPSDASLSPASQNSPYSITPVSQGSPGSSGIGSPMAASAI NGLSVPSDASLSPASQNSPYSITPVSQGSP SSGIGSPMA++AI NGLSVPSDASLSPASQNSPYSITPVSQGSPASSGIGSPMASNAI OMLM01004801.1:-3550 CAGAGagcagcaggtctcgacatctaaacgtcgtcgatgagacagtaga -1> agtgtcgacctcccgaaccagtcctcagcccgcgtggctccact ttgcgctttctaactgccaccccaacgtttcctctgtcgtaccc SPP00000628_2.0 615 TKIHSRRFR YCNHVLSKEIDESV TKIHSRRFR YCN VLSKEIDESV TKIHSRRFR E:E[gag] YCNQVLSKEIDESV OMLM01004801.1:-3413 aaacacctaGAGTAAGCA Intron 9 CAGGttacgtaagaggag catagggtg <2-----[3384 : 2061]-2> agaattgaataagt agctcgtta ctcaggtggctgcg SPP00000628_2.0 639 TLLLQELVRFQERVYQKEPSKAKAKRRLVMGLREVTKHMKLHKIKCVII TLLLQELVRFQERVYQK+P+KAK+KRRLVMGLREVTKHMKLHKIKCVII TLLLQELVRFQERVYQKDPTKAKSKRRLVMGLREVTKHMKLHKIKCVII OMLM01004801.1:-2017 acctcgcgctcgcgtcagcaagatacccgagcaggaacaatcaaatgaa ctttaattgtaagtaaaaccacacaggtttgtgatcaatataatagttt tggggagtctggagcggttggcacactgcgtcggcagcggatgcatcct SPP00000628_2.0 688 SPNCEKIQAKGQNQTPIHKHYRFLVKY SPNCEKIQAKG + + K SPNCEKIQAKGNSGNTV-----TFTKI N:I[ata] OMLM01004801.1:-1870 tcatgaacgagaagaag ataaaATGTATTTA Intron 10 ccagaatacagaggact ctcat <2-----[1802 : 386] tcctggcgaattcttac ttaat SPP00000628_2.0 715 DDGRACAGLFGLFGYSVSQGLFNKLVSLTEEARRAYKEMVSALEQ D G + + S+ QGLFN+LVSLTEEAR+AYK+MVSALEQ DFGNTRSSHVFYLVKSLLQGLFNRLVSLTEEARKAYKDMVSALEQ OMLM01004801.1: -388 CAGAgtgaacttcgtttgatcccgctactgtcagggaagtagagtgcgc -2> atgacgccattattacttagttagttctcaacgacaaattcctaa ctacaaatttttgtacctgtccctagtgaagtggccgcggatgga SPP00000628_2.0 761 EQAEEALKNVKKVPHHMGHSRNPSAASAISFCSVISEPISEVNEKEY EQAEEALKN KKVPHHMGHSRN SAASAISFCS++SEPISEVNEKEY EQAEEALKNDKKVPHHMGHSRNHSAASAISFCSIFSEPISEVNEKEY OMLM01004801.1: -249 gcggggcaagaagcccagctcactggtgattttattgcatggagagt aacaactaaaaatcaatgacgaaccccctctgcttcactcataaaaa gatggtgatcgacaccgttctcctttttccctccctgactgctaggt // Making a R in phase 2 intron Making a D in phase 1 intron Making a C in phase 1 intron Making a H in phase 2 intron Making a I in phase 1 intron Making a E in phase 1 intron Making a E in phase 2 intron Making a I in phase 2 intron >OMLM01004801.1:subseq(0,38632).pep QDVKLSAEVEPFIPQKKGLEGPLVSMSLSGEVGSGGGGGGVGGGGAVETTPIPSYLITCY PFVQENQPNRQHPMYNGGELRWQQPNPSPGGPYLAYPILSSPQPPVSNDYTYYQIMPAPC PPMMGFYQPFPGTYAGPVQAGVVNPVSADVGERPLPLGPAYGISTPRGRGMVRPNILPKL GVCQPPRGRRPPTRSVAVQKEVCTFGPDGRTKTVLLVDAAQQTDFPAEVSGRCAAERASP SLWKNRTKRRRASHPTESYNEQGASEADIDSDSGYCSPKHNQATGATQRTADNTAAPTVC TWVNVASQATPKSWVDRNSQFHRTDQRKNPEQRNISQVHGYPGRVPNPSEQRLQPAVVTA TELTPEPLYFEVREGLLXECLFYXISLHHCYMTLYVRVGSVCLFCQNLFAXCQDEDEFPD LATGGGVQRSNKPESTPAQTHTQPKLPKNLVIQIQIKVYIHSHILLISLSCSPVGTAPFH SSTNLPSMLKGHQQPYSAPHNALDSTAPRIKRGKEREIPKVKRPTALKKIILKEREGKKG KTSVEQESSGQEEHGDECLHFTDDLSREPASQEENGLSVPSDASLSPASQNSPYSITPVS QGSPASSGIGSPMASNAITKIHSRRFREYCNQVLSKEIDESVTLLLQELVRFQERVYQKD PTKAKSKRRLVMGLREVTKHMKLHKIKCVIISPNCEKIQAKGNSGNTVTFTKIIDFGNTR SSHVFYLVKSLLQGLFNRLVSLTEEARKAYKDMVSALEQEQAEEALKNDKKVPHHMGHSR NHSAASAISFCSIFSEPISEVNEKEY // >OMLM01004801.1:subseq(0,38632).[10389:6177].sp CAGGATGTGAAGCTTTCAGCTGAAGTGGAGCCGTTCATCCCACAGAAAAAAGGTCTTGAA GGACCACTAGTCAGCATGAGTCTTTCTGGAGAGGTGGGCAGTGGAGGAGGGGGCGGAGGT GTAGGAGGTGGCGGAGCAGTGGAAACCACTCCCATACCCAGCTACCTCATCACCTGCTAT CCCTTTGTCCAGGAGAACCAACCCAACAGGCAACATCCTATGTATAATGGAGGGGAGCTG CGCTGGCAGCAGCCTAACCCTAGCCCTGGTGGTCCATACCTGGCCTACCCCATCTTGTCT TCCCCTCAACCTCCTGTCTCAAATGACTACACTTACTACCAGATTATGCCTGCTCCGTGC CCACCCATGATGGGCTTCTACCAGCCTTTTCCTGGCACCTATGCGGGTCCCGTGCAAGCT GGAGTGGTCAACCCTGTCTCAGCAGATGTTGGTGAAAGACCATTGCCTCTGGGCCCAGCA TATGGAATATCCACTCCGAGGGGAAGAGGCATGGTCAGACCAAATATTCTCCCTAAGTTA GGAGTGTGCCAGCCTCCAAGGGGTCGCCGGCCTCCAACGAGGAGTGTAGCTGTGCAAAAG GAGGTGTGCACCTTTGGACCTGATGGTAGGACCAAGACAGTCTTGTTGGTGGATGCAGCA CAACAGACTGATTTCCCAGCTGAGGTATCAGGACGCTGTGCTGCTGAGCGGGCTAGTCCT TCACTGTGGAAGAACCGAACAAAGAGAAGACGAGCATCCCATCCAACTGAAAGCTACAAT GAGCAGGGAGCCAGTGAAGCAGATATAGACAGTGACAGCGGCTACTGTAGCCCCAAACAC AACCAGGCAACTGGGGCAACACAACGAACAGCAGACAATACAGCAGCACCCACGGTGTGT ACGTGGGTAAATGTAGCCTCTCAAGCTACCCCAAAGTCCTGGGTGGACAGGAACAGTCAG TTCCACAGAACAGACCAGAGGAAGAATCCCGAACAGAGAAACATCTCACAGGTACACGGC TATCCAGGGCGTGTGCCTAACCCATCAGAACAAAGGCTACAGCCAGCAGTGGTCACTGCC ACTGAGCTCACTCCAGAGCCCCTCTACTTTGAGGTTAGAGAAGGTTTATTG >OMLM01004801.1:subseq(0,38632).[6177:6161].sp GAATGCCTTTTTTAT >OMLM01004801.1:subseq(0,38632).[6160:6081].sp ATCTCCTTACATCATTGTTACATGACACTTTACGTTAGGGTAGGTAGTGTTTGCTTATTT TGCCAAAATCTTTTTGCC >OMLM01004801.1:subseq(0,38632).[6078:107].sp TGTCAGGATGAAGATGAGTTCCCAGATCTTGCTACTGGAGGGGGTGTCCAACGCAGCAAC AAACCAGAATCCACTCCAGCTCAAACACACACGCAACCTAAACTACCCAAAAACCTGGTA ATCCAAATACAAATCAAAGTTTATATCCATAGTCACATTTTGTTAATTTCATTGTCCTGT TCTCCAGTTGGAACAGCTCCATTCCACAGCTCGACCAATCTGCCGTCCATGTTGAAGGGT CATCAGCAGCCATACTCAGCACCACATAATGCCCTGGATTCCACTGCACCTCGTATCAAG AGAGGGAAAGAGAGAGAAATCCCTAAAGTTAAACGGCCAACAGCCCTGAAGAAGATTATC CTGAAGGAACGTGAAGGGAAGAAAGGGAAGACCAGTGTAGAACAAGAGTCTTCAGGTCAG GAGGAGCATGGGGATGAGTGTCTACATTTTACTGATGATCTTTCACGAGAGCCTGCATCC CAAGAAGAGAATGGTCTGAGCGTGCCCAGTGATGCTTCCCTTTCACCAGCCAGTCAGAAC TCCCCATACAGCATCACCCCAGTATCCCAGGGTTCTCCTGCCAGCTCTGGCATTGGGAGT CCCATGGCTTCAAACGCCATCACAAAGATCCATAGCCGGCGTTTTAGAGAGTACTGTAAC CAAGTGTTGAGTAAGGAGATCGATGAGAGCGTGACTCTGCTGTTGCAGGAACTGGTTCGC TTTCAGGAGCGAGTGTACCAGAAGGATCCTACGAAGGCCAAATCCAAACGCCGTCTGGTC ATGGGTCTCAGGGAGGTCACAAAGCACATGAAGTTACATAAGATCAAATGTGTCATCATT TCTCCCAACTGTGAGAAGATCCAGGCAAAAGGTAATAGCGGTAATACAGTCACTTTTACA AAAATTATAGACTTTGGAAACACACGATCATCTCATGTTTTTTATTTGGTTAAATCCCTC CTTCAGGGTCTCTTCAACCGTTTAGTGTCTCTGACAGAAGAGGCTAGGAAGGCCTACAAG GACATGGTGTCAGCTCTGGAGCAAGAGCAAGCTGAGGAGGCTCTGAAAAATGACAAGAAA GTCCCACACCACATGGGTCATTCCCGTAACCACTCTGCTGCTTCTGCTATCTCCTTCTGT TCCATCTTCTCTGAGCCAATCTCTGAGGTCAATGAAAAGGAGTAT // OMLM01004801.1:subseq(0,38632) GeneWise match 10389 6179 343.30 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 10389 10181 0.00 - 0 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 10180 9087 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 9086 8759 0.00 - 1 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 8758 8648 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 8647 8515 0.00 - 0 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 8514 7912 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 7911 7684 0.00 - 2 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 7683 6788 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 6787 6670 0.00 - 2 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 6669 6294 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 6293 6179 0.00 - 1 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise match 6177 6163 -11.26 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-2 OMLM01004801.1:subseq(0,38632) GeneWise cds 6177 6163 0.00 - 0 OMLM01004801.1:subseq(0,38632)-genewise-prediction-2 OMLM01004801.1:subseq(0,38632) GeneWise match 6160 6083 -16.25 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-3 OMLM01004801.1:subseq(0,38632) GeneWise cds 6160 6083 0.00 - 0 OMLM01004801.1:subseq(0,38632)-genewise-prediction-3 OMLM01004801.1:subseq(0,38632) GeneWise match 6078 109 483.48 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-4 OMLM01004801.1:subseq(0,38632) GeneWise cds 6078 5958 0.00 - 0 OMLM01004801.1:subseq(0,38632)-genewise-prediction-4 OMLM01004801.1:subseq(0,38632) GeneWise intron 5957 4173 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-4 OMLM01004801.1:subseq(0,38632) GeneWise cds 4172 3940 0.00 - 2 OMLM01004801.1:subseq(0,38632)-genewise-prediction-4 OMLM01004801.1:subseq(0,38632) GeneWise intron 3939 3777 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-4 OMLM01004801.1:subseq(0,38632) GeneWise cds 3776 3644 0.00 - 0 OMLM01004801.1:subseq(0,38632)-genewise-prediction-4 OMLM01004801.1:subseq(0,38632) GeneWise intron 3643 3548 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-4 OMLM01004801.1:subseq(0,38632) GeneWise cds 3547 3385 0.00 - 2 OMLM01004801.1:subseq(0,38632)-genewise-prediction-4 OMLM01004801.1:subseq(0,38632) GeneWise intron 3384 2061 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-4 OMLM01004801.1:subseq(0,38632) GeneWise cds 2060 1803 0.00 - 1 OMLM01004801.1:subseq(0,38632)-genewise-prediction-4 OMLM01004801.1:subseq(0,38632) GeneWise intron 1802 386 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-4 OMLM01004801.1:subseq(0,38632) GeneWise cds 385 109 0.00 - 1 OMLM01004801.1:subseq(0,38632)-genewise-prediction-4 //